Villas and holiday homes in Japan

71 properties villas, cottages and whole homes across 6 destinations in Japan, from € 84 per night for two adults.

Live prices, sampled for a two-night stay a month ahead. Measured 2026-09-25.

Villas and holiday homes in Japan at a glance

We track 71 properties villas, cottages and whole homes across 6 destinations in Japan. Kanazawa has the most with 26; Naha has the lowest starting price at € 84 a night. Typical prices across the country run from € 123 to € 315 depending on where you go, which is a wider gap than most travellers expect within one country. Staying in Kyoto costs about 2.6 times what Naha does for the same kind of property, so if your plans are flexible the destination matters more than the hotel.

DestinationPropertiesFrom / nightTypical
Kanazawa26from € 96€ 148
Hakone21from € 146€ 265
Nara7from € 135€ 236
Kyoto6from € 231€ 315
Naha6from € 84€ 123
Nagoya5from € 162€ 227

What to look for in villas and holiday homes in Japan

Whole houses rented to one party, usually with a private garden and often a private pool. The appeal is exclusivity: no shared corridors, no neighbours through the wall, and space to spread out. The cost per person falls quickly as the group grows, which is why a villa can undercut four hotel rooms.

Before you book, check

  • Whether staff are included: many villas come with a housekeeper or a cook, and some do not.
  • Whether the pool is heated, private, and how it is fenced if children are coming.
  • The distance to a shop and a restaurant. Villas are frequently rural.
  • The security deposit, how it is taken, and when it is returned.
The thing people get caught by

Photographs of villas are the most flattering in the industry. Look for guest photos, check the review score for accuracy of the listing, and read what people say about the road in — "ten minutes from the beach" is sometimes ten minutes down an unmade track.

Worth it for: Groups, families travelling together, and longer stays where you want a base rather than a room.

Highly rated in Japan

Teramachiya Wind Bell Temple Guest House
Teramachiya Wind Bell Temple Guest House
Kanazawa
€ 131 from / night
Ainotsuji Machiya House
Ainotsuji Machiya House
Kanazawa
€ 336 from / night
LUX HAKONE YUMOTO
LUX HAKONE YUMOTO
Hakone
€ 670 from / night
Stagione Hakone Chokokunomori
Stagione Hakone Chokokunomori
Hakone
€ 200 from / night
Hana Naramachi
Hana Naramachi
Nara
€ 561 from / night
Residence Ferie Nara station
Residence Ferie Nara station
Nara
€ 236 from / night
Shibashi Umeyacho
Shibashi Umeyacho
Kyoto
€ 316 from / night
Rinn Shiki Juraku
Rinn Shiki Juraku
Kyoto
€ 293 from / night

More in Japan

All hotels in JapanVillas and holiday homes worldwide

Frequently asked

How many villas and holiday homes are there in Japan?

We can currently book 71 across 6 destinations in Japan, starting from €84 per night for two adults.

Which destination in Japan has the most?

Kanazawa, with 26 properties villas, cottages and whole homes.